BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H11LP1|AL429135
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1730 0.0
>3x_Contig1800
Length = 38778
Score = 1730 bits (870), Expect = 0.0
Identities = 894/904 (98%), Gaps = 1/904 (0%)
Strand = Plus / Minus
Query: 4 ctggacgtaaataccggaatttatatccagaagaggaaaaacataaacaaactttacgcg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16634 ctggacgtaaataccggaatttatatccagaagaggaaaaacataaacaaactttacgcg 16575
Query: 64 ttttgaggtacaacacaatatagacgcgtcatgttgaccgacgtggaatattccttaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16574 ttttgaggtacaacacaatatagacgcgtcatgttgaccgacgtggaatattccttaagt 16515
Query: 124 aggaagatctgctcgtcgcaaggcacaatacagcctcaataataatgttgtgcggttgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16514 aggaagatctgctcgtcgcaaggcacaatacagcctcaataataatgttgtgcggttgtg 16455
Query: 184 ccacgagatttagctagatatatctaagcctttggagctcgaggagtccgtaaagcacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16454 ccacgagatttagctagatatatctaagcctttggagctcgaggagtccgtaaagcacct 16395
Query: 244 caaaataatagatatgawacaataaaattaactataaaatacgatctttttcccaagatt 303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16394 caaaataatagatatgaaacaataaaattaactataaaatacgatctttttcccaagatt 16335
Query: 304 ctttgatctaaaacctgtgactagtcaaaagtagttaactgtcattttcatagtaagtac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16334 ctttgatctaaaacctgtgactagtcaaaagtagttaactgtcattttcatagtaagtac 16275
Query: 364 ccaagacgctcaaaacgtctttktgttaggtgtgggctagcaaaatagcttagtgaatgt 423
||||||||||||||||| || | ||||||| |||||||||||||||||||||||||||||
Sbjct: 16274 ccaagacgctcaaaacg-ctatgtgttaggagtgggctagcaaaatagcttagtgaatgt 16216
Query: 424 cacggtaataataaannagcggatacggataaggctactgacaagatgagaataactcct 483
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16215 cacggtaataataaaaaagcggatacggataaggctactgacaagatgagaataactcct 16156
Query: 484 tcgtgcgtaataatgggaggaatctcactttcgggttcggttttatcgcggacacttaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16155 tcgtgcgtaataatgggaggaatctcactttcgggttcggttttatcgcggacacttaca 16096
Query: 544 gatgtggatatgttttttacttgggtggttccaaaagaacaatcatttttgatttactgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16095 gatgtggatatgttttttacttgggtggttccaaaagaacaatcatttttgatttactgc 16036
Query: 604 tcttgctaacaactgagaacaaaacgtaacagcttagcttatttccaacatttatatgca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16035 tcttgctaacaactgagaacaaaacgtaacagcttagcttatttccaacatttatatgca 15976
Query: 664 cagcttatctgcataacacagaaactagacaaaactgaaataaagtttgagawgttggac 723
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 15975 cagcttatctgcataacacagaaactagacaaaactgaaataaagtttgagatgttggac 15916
Query: 724 aaaaaggatatgggatgggttttgttagggaaggcacgtcaactctcaacttttgaagct 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15915 aaaaaggatatgggatgggttttgttagggaaggcacgtcaactctcaacttttgaagct 15856
Query: 784 ttgcagtatactgatcgttataatgatagctggtgtacgaaatttgggatactaagaact 843
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 15855 ttgcagtatactgatcgttataatgatagctggtgtacgaaatttggaatactaagaact 15796
Query: 844 aatgtttacttaggtgaaaagtttatwaggagggcacgaaagacagtatgggtttactgc 903
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 15795 aatgtttacttaggtgaaaagtttataaggagggcacgaaagacagtatgggtttactgc 15736
Query: 904 cgaa 907
||||
Sbjct: 15735 cgaa 15732
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5617
Number of Sequences: 1807
Number of extensions: 5617
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)